|
ATAC-Seq Analysis Using MACS2 Callpeak
|
|
1
|
397
|
November 12, 2024
|
|
MarkDuplicates- inadequate memory
|
|
1
|
97
|
February 10, 2025
|
|
Can't unpause job
|
|
3
|
113
|
January 8, 2025
|
|
ATAC-seq Analysis Using MACS2 Callpeak
|
|
1
|
163
|
November 13, 2024
|
|
error: more sample fields than samples listed in header samples
|
|
0
|
670
|
July 7, 2021
|
|
paired-end histogram failure
|
|
3
|
350
|
December 12, 2023
|
|
Can use BWA-MEM to concatenated files
|
|
1
|
940
|
May 21, 2023
|
|
picard MarkDuplicates optical_duplicate_pixel_distance capped at 500 in GUI
|
|
1
|
591
|
January 13, 2023
|
|
Problems Adding Tags to Elements
|
|
2
|
982
|
December 20, 2022
|
|
MACS2 scientific result troubleshooting
|
|
6
|
1018
|
June 16, 2022
|
|
Plotfingerprint (to check the strength IP in chip)
|
|
0
|
325
|
April 25, 2022
|
|
Deduplication for miRNA analysis
|
|
4
|
1048
|
September 27, 2021
|
|
PICARD_MARK DUPLICATES_ high % NON-OPTICAL DUPLICATES
|
|
0
|
654
|
July 28, 2021
|
|
Indexing reference genomes with Data Managers: Resources, tutorials, troubleshooting
|
|
28
|
8210
|
July 7, 2021
|
|
What tools approprite for remove duplicate reads from BAM file in Usegalaxy
|
|
3
|
2080
|
April 19, 2021
|
|
OPTICAL_DUPLICATE_PIXEL_DISTANCE in MarkDuplicates tool
|
|
0
|
421
|
January 27, 2021
|
|
Alternative tool for split'N'trim
|
|
0
|
460
|
May 17, 2020
|
|
Fix a workflow for Variant calling from WGS data upon mutagenesis-screen
|
|
2
|
774
|
May 1, 2020
|
|
Conda installation requested and failed in local galaxy
|
|
8
|
2755
|
April 2, 2020
|
|
High unassigned ambiguity counts for featureCounts data on bacterial transcriptomics
|
|
2
|
1988
|
March 25, 2020
|
|
BamLeftAlign error unable to find fasta index -- use "fasta" version of genome or natively indexed genome
|
|
22
|
3309
|
July 18, 2019
|
|
java.lang.OutOfMemoryError, Mark Duplicates in Picard indexer builder
|
|
2
|
1483
|
June 3, 2019
|
|
Error with markduplicates tool
|
|
0
|
815
|
May 22, 2019
|
|
[Bug] Duplication of Datasets After Collection Zip
|
|
8
|
975
|
December 18, 2018
|