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Troubleshooting the Kraken2 Data Manager and CVMFS indes
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1
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116
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September 15, 2025
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How to install kraken2 database
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5
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802
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June 5, 2024
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Data manager for virhunter
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3
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101
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July 23, 2025
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Data Manager for blastdb
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1
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98
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February 20, 2025
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Remove entries in Data Manager: all_fasta.
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4
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117
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February 20, 2025
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Pharokka Database
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10
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875
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January 2, 2025
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Remove installed databases
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2
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138
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August 14, 2024
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Use Create DBKey and Reference Genome to define new entries
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5
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179
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August 13, 2024
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funannotate data manager error url not found
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1
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105
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July 5, 2024
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Freebayes errors out in v. 1.3.6 vs 1.3.1
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4
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777
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December 16, 2022
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gemini database download error
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3
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446
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November 28, 2022
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Creating a customized genome index (large) on a private Galaxy server -> Use Data Managers
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3
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705
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August 23, 2022
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No options available (Select Reference Genome)
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3
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1631
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June 14, 2022
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Connection timed out error while running data_manager_fetch_genome_dbkeys_all_fasta
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1
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641
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January 6, 2022
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Building an indexed genome file for GATK tools
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13
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2608
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October 27, 2021
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Delete data created with data manager?
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1
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420
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October 26, 2021
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Any way to align a single cDNA sequence against the raw nanopore data?
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2
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699
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October 25, 2021
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Gaps in the genome assembly
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0
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405
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August 31, 2021
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Indexing reference genomes with Data Managers: Resources, tutorials, troubleshooting
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28
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8210
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July 7, 2021
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Setting a custom database input for tools -- in a workflow or on a tool form
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8
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1146
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June 23, 2021
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Can't use Bowtie2 index builder - "Requested version unavailable" error
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3
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687
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June 14, 2021
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Extract a subsequence from the whole genome assembly?
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11
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1857
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June 11, 2021
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Alternative to DM tools for inbuilt reference sequence
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3
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873
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November 30, 2020
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Baboon reference genome
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2
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537
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October 30, 2020
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BWA-MEM Index Error - fail to open file
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1
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2189
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September 24, 2020
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Galaxy can't find custom blast db
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2
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925
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June 30, 2020
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Fatal error: Exit code 1 () when using SAM FASTA Index Builder.
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2
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1375
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March 3, 2020
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Reference Genome in some tools - Fully indexing genomes with Data Managers
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3
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1399
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January 27, 2020
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rsync error on syncing my local galaxy with rsync g2 data manager
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2
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810
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December 7, 2019
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Picard indexer (Fatal error: Exit code 1)
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2
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1106
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November 28, 2019
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