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Kraken2 build databases download fails with not found path
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10
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46
|
February 6, 2026
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Custom genome? How to display in IGV! bigwigs, bams, any coordinate data
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7
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20
|
January 30, 2026
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Issue upgrading database for local Galaxy
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1
|
39
|
January 23, 2026
|
|
blastp against nr database
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8
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3724
|
October 4, 2025
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No link for UCSC to visualise datasets
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23
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495
|
May 24, 2024
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How database assignments are used to access a fasta index: custom genomes, custom builds, server indexes
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2
|
192
|
September 17, 2024
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Adding the tardigrade (H. exemplaris) genome to Galaxy
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2
|
203
|
April 11, 2024
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|
Trackster adding new tracks to visualisation
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5
|
1527
|
November 20, 2023
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|
Files database/objects taking up huge amounts of space
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|
1
|
224
|
October 26, 2023
|
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bam to bigwig conversion fail
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1
|
243
|
August 24, 2023
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|
No Uniprot Swissprot database available in Diamond alignment tool for short sequences
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1
|
336
|
August 7, 2023
|
|
CHM13 T2T genome not found in options for some tools
|
|
10
|
1085
|
July 20, 2023
|
|
Where to get precursor, mature, star miRNA for (MiRDeep2 Quantifier)
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|
1
|
504
|
November 23, 2022
|
|
Unable to select VCF with Gemini load? Tool form includes full input requirements
|
|
1
|
764
|
June 21, 2022
|
|
Database of Galaxy Main Server
|
|
2
|
387
|
March 1, 2022
|
|
"502 Bad Gateway" when using Postgres database on external server
|
|
1
|
1479
|
September 11, 2021
|
|
Why is database so large?
|
|
9
|
1274
|
September 23, 2022
|
|
Error in Naive Variant Caller (NVC) in usegalaxy.org -- Resolved
|
|
7
|
764
|
February 15, 2021
|
|
Alternative to DM tools for inbuilt reference sequence
|
|
3
|
824
|
November 30, 2020
|
|
DBKey necessary?
|
|
1
|
447
|
June 19, 2020
|
|
Samtools merge error
|
|
3
|
2098
|
March 16, 2020
|
|
issue with SICER input files
|
|
2
|
868
|
February 6, 2020
|
|
Search Data Libraries Datasets
|
|
0
|
678
|
January 5, 2020
|
|
Add new version of reference genome: Tribolium castaneum (red flour beetle) Tcas5.2
|
|
2
|
889
|
December 4, 2019
|
|
Tool form does not list expected indexed reference genome: Solution -- assign the "database" to the inputs
|
|
1
|
614
|
December 2, 2019
|
|
NCBI's GRCh38 and UCSC's hg38
|
|
1
|
1063
|
September 30, 2019
|
|
Allowed makeblastdb file size (1GB), cut genome to smaller pieces?
|
|
2
|
2206
|
September 3, 2019
|
|
add new version of reference genome: C.elegans WS235 ce11
|
|
2
|
1147
|
March 26, 2019
|
|
Addition of reference genome: Phoenix dactylifera
|
|
4
|
985
|
February 7, 2019
|
|
A. franciscana genome not a listed reference
|
|
1
|
769
|
January 29, 2019
|