Hi there, i am trying to analyze paired end NGS CRISPR Screen Data using the Mageck Flute Pipeline. After running fastqc and fastq groomer, I used cutadapt to trim adapter sequences. When using Mageck count, I get this error: Cannot automatically determine the --trim-5 length. Only 0.0 % of the r…

Mageck count error: Cannot automatically determine the --trim-5 length

jennaj March 1, 2023, 8:40pm 2

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