16S Analysis Using Mothur Using other Hypervariable Regions

Good day!

I would like to inquire about how and where to acquire a .fasta file for another hypervariable region. In the tutorial, the V4 fasta file was given. I was wondering where to acquire a fasta file for other hypervariable regions such as V2 for analysis. Thank you very much.

Hi @Federico_Cristobal_I

Mothur reference help README for the SILVA v138 reference files

Mothur Q&A Creating a customized reference alignment for V1-V2 - Commands in mothur - mothur

Galaxy Tutorials