Assistance Required: Missing Tools from Galaxy ToolShed

Hello Galaxy Community,

I hope this message finds you well. I am currently facing an issue with two tools that are not available on the Galaxy ToolShed, and I would appreciate your guidance or assistance.

The specific tools in question are:

1. tpgreptool (version 1.1.1) -

URL: toolshed.g2.bx.psu.edu/repos/bgruening/textprocessing/tpgrep_tool/1.1.1

2. tpreplacein_line (version 1.1.2) -

URL: toolshed.g2.bx.psu.edu/repos/bgruening/textprocessing/tpreplaceinline/1.1.2

When I attempt to access these tools in the ToolShed, they appear unavailable. I need these tools for a project I’m working on, which involves significant text processing within Galaxy. Here’s what I’ve done so far: - Double-checked the URLs and searched the ToolShed for similar tools, but could not locate them. - Attempted to find alternative tools, but have not found suitable replacements that meet my needs. If anyone has encountered a similar issue or knows of current locations or alternatives for these tools, your input would be greatly appreciated.

Additionally, if there are any suggestions on how to resolve this or potentially useful contacts within the community, I would be grateful for your help.

Thank you in advance for your assistance!

Best regards,

Williams

Welcome @Williams

Agree, uniquely useful tools! Does this look like what you are looking for? These are the versions hosted at UseGalaxy servers (as another way to review). Please let us know! :slight_smile:


Current versions hosted in a tool suite

text_processing

Bundled tools include:

tp_grep_tool 9.5+galaxy2

tp_replace_in_line 9.5+galaxy2