Greetings, I am currently using the Galaxy Europe platform to analyze 16S sequencing data, while using the 16S Microbial Analysis tutorial ( https://galaxyproject.github.io/training-material/topics/metagenomics/tutorials/mothur-miseq-sop/tutorial.html#otu-clustering ). I have reached the step where t…

@Erica_Dasi we hope that this bug is now fixed. Please let us know if you encounter it again. Sorry for the trouble! Bjoern

Good Afternoon, I wanted to follow up in regards to my previous message. I have been trying to continue with my 16S sequencing analysis in the Galaxy Platform. Unfortunately, I have not been able to complete my workfow. When I attempt to use a variety of tools, I receive an error message indicating…

Hi @Erica_Dasi First, try a rerun as these look like server-side issues – the Galaxy EU https://usegalaxy.org server was undergoing an update Mon-Weds. The issue may be resolved by now. If that fails again – or maybe they can help now – let’s ping the admin here: @bjoern.gruening . He is in Germany…

Thank you for reaching out. Unfortunately, I have encountered the same problem again using the sub.sample tool. The output that I receive when using the tool is an error indicator in red. I have attached a screenshot of along with this message. When I click the sub.sample tool to retrieve the associ…

Good Afternoon, Hope all is well. I wanted to follow up in regards to my previous message. I look forward to receiving your assistance. Sincerely, Erica

ping @bjoern.gruening He may request a bug report. If you haven’t sent one in already, be sure to put a link to this thread in the comments so the EU team has the full context and can link the reported issues. Update/edit: Oh! Your input list is empty. That’s why tool this tool is failing Check t…

Hi Jennifer, I hope you are well. Thank you for your assistance and suggestions with addressing the challenge I am experiencing. I have carefully reviewed the previous steps to ensure that the correct outputs are being used. Unfortunately, I am still receiving the same error message. I have been fo…

Hi @Erica_Dasi , we can try to look into your history or at your bug report. For this please sent us a bug report by clicking on the bug-icon at the red-dataset or share us your history. Thanks, Bjoern

Good Morning @bjoern.gruening , Hope you are well. I wanted to follow up in regards to receiving assistance with the challenge I am experiencing with the subsample tool. I submitted an error report on Monday, Oct. 28, 2019 and awaiting a response from the Galaxy Europe Administrators. Thank you in a…

Galaxy Community Help

Assistance with resolving Sub.sample tool output error

usegalaxy.eu support

gtn-tutorial, metagenomics, server-side-error, mothur

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