Hi all, I’m getting an error when using the last step of the LEfSe galaxy module ( Plot LEfSe results). Error text posted below Traceback (most recent call last): File “/shed_tools/testtoolshed.g2.bx.psu.edu/repos/george-weingart/lefse/a6284ef17bf3/lefse/./plot_res.py”, line 151, in else: plot_h…

Hi @Kevin_Rey [image] Kevin_Rey: ValueError: invalid literal for float(): 3wo This part of the error message indicates that there is a problem with the input data to this step. Maybe check your data/settings again? Maybe the wrong column of data was selected for plotting. Or, there is an une…

Error in Plot LEfSe results, doesn't plot results for comparison of 2 classes

jennaj Split this topic October 14, 2020, 4:27pm 3

A post was split to a new topic: Errors using LEfSe tool through the Galaxy/Huttenhower lab website

Topic		Replies	Views
Error message when performing lefse task lefse	1	680	April 16, 2021
Troubleshooting an error with Lefse tool-install , galaxy-local , toolshed	4	937	February 7, 2022
plot error in the LEFSe tool usegalaxy.org support third-party-identities	0	301	May 13, 2020
Question：an error in LefSe	2	967	December 3, 2018
Need Help with Galaxy LEfSe LDA Step Error galaxy-huttenhower	5	26	January 21, 2025

Error in Plot LEfSe results, doesn't plot results for comparison of 2 classes

Related topics