Hi I’m in “GROMACS initial setup of topology and GRO structure file” I have specified the necessary parameters and uploaded my PDB file to the history. It is green. I try to run the app but it says “No pdb datasets available”! Can you help me?

Hi @henrrik_prendushi Glad you sorted out the first part. Now, for the current error, I wondering which server you are working at. I’m also wondering if you tried to use the tutorial example yet. For these tutorials, the UseGalaxy.eu server is usually the best choice. Why? That server hosts more o…

GROMACS initial setup

jennaj Split this topic December 2, 2024, 5:27pm 6

A post was split to a new topic: PDB format versus PDQ

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GROMACS initial setup

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