GTDB-Tk Classify genomes - missing database

Dear Team,

I like to use the tool, but it requires a database. While ofher have asked about this (and there was some solution), currently no database is available.

The option says the following:

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Please provide a value for this option.

GTDB-Tk database * required

No options available.

This version of GTDB-Tk requires GTDB version 226. Please contact your service administrator if this version is not available to select.

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Thanks for help! Cycle-de

HI @cycle !

Try toggling into the version with an index prepared. This topic has the details with a screenshot → Use GTDB-Tk database: Navigating tool versions

Please let us know if this works for you! :slight_smile:

Dear Jennaj, while this works, it uses database v220 from 2024. The newest database is v226. Since classification moves fast in science, I assume many would be happy to have a newer database version available. Best, Cycle

Hi @cycle

An update is still pending for now. I’ve linked in your request to the existing one.