How to perform the anaysis of taxonomic on raw reads from the mixed sample

[jennaj]

@ps2pspgood

Do you knwo how to add proxy in to the galaxy?

For this part, please see the administration tutorials here →

@jennaj

Local Galaxy

A local Galaxy server is a choice for personal use, and can be scaled to support multiple users.

Your service can be hosted publicly or privately. Connect to local, institutional, or commercial cloud computing resources and customize your usage policies.

Local Galaxy

• Training Network Galaxy server administration training
• Technical Documentation Galaxy releases, plus Admin and Development docs
• Open-source code base GalaxyProject Github repositories

@ps2pspgood

Finally, I found a tool that can merge the output of metaphlan, so could you give me some suggesstion on drawing stacked bar graph for the output of metaphlan?

This tutorial is a good place to review → Hands-on: Taxonomic Profiling and Visualization of Metagenomic Data / Taxonomic Profiling and Visualization of Metagenomic Data / Microbiome

But for a simple stacked bargraph, you could also click into the Visualize icon (FAQ: Different dataset icons and their usage) and review the Charts tools there. Those take in tabular datasets. You could manipulate your reports in any way to you want to produce custom graphics (common manipulation tools are here Hands-on: Data Manipulation Olympics / Data Manipulation Olympics / Foundations of Data Science).