Hi @Tyler_Coale
That looks like a dependency problem but could also be a job that died, or failed for some transient cluster reason (a rerun would fix the latter). Inputs are another factor to consider.
What happens if you run this with fewer Applications? Start by excluding these. The tool is reporting that the input is a mismatch.
I’m not even sure how those were even selected at UseGalaxy.org.au. The most current version of the tool filters Applications based on the Protein versus DNA toggle at the top of the form, and those listed in the error message are no longer included/available for either.
If you need more help, please share more details. Troubleshooting errors