I’m developping my own tool in a local Galaxy and I would like to dynamically output multiple Rdata… It works very well with my table in tsv files with the following lines :
<collection name="table_result" type="list" label="result_tables"> <discover_datasets pattern="__designation_and_ext__" directory="tsv" format="tsv" /> </collection>
I use nearly the same lines for output Rdata :
<collection name="rdata_result" type="list" label="rdata_results"> <discover_datasets pattern="__designation_and_ext__" directory="rdata" format="rdata"/> </collection>
But I obtain the following error :
Error in gzfile(file, "wb") : cannot open the connection Calls: save -> save.default -> <Anonymous> -> gzfile In addition: Warning message: In gzfile(file, "wb") : cannot open compressed file './rdata/f4fresult_for_run1_class.Rdata', probable reason 'No such file or directory' Execution halted
So first thing : is it possible to make something like this with as result two collection, one with tables in tsv format and one collection with Rdata ?
Second thing : if yes, how can I do it ?
Thanks a lot !