Hi I am having problems with rendering of svg output. Galaxy interprets this as text. Even if I use browser or some other tool that recognizes svg format, I get graphics, but no text (squares represent text). Is there anything I need to install for full svg support (I use android and windows 11)?

Hi @droslj Apologies for the delay. I was able to reproduce the problems with even with our test data. When working at UseGalaxy.org , the output option is PDF (only). A cross-test at UseGalaxy.eu produced correct graphics for PDF, PNG, SVG, and JPEG. The tool has a bunch of usage disclaimers in …

Hi @droslj This forum is focused on the biomedical research platform Galaxy Project https://galaxyproject.org/ . We are completely unrelated to phones or other devices with a similar name. :slight_smile:

The issue I am trying to solve is the output of Variant Frequency Plot tool. I get for output .svg xml formatted data instead of graphics, which when input into into any of the tools that understands .svg format produces plot with graphics only, without text. I naturally assumed the tool produces co…

[image] droslj: Variant Frequency Plot Ok, thanks for explaining! So, you think that the graphic output by the tool has incomplete metadata when read in by other downstream tools? Could you share a simple example? We can share that with the tool developer and fix anything that may be going w…

I was using Variant Frequency Plot (Galaxy Version 1.0+galaxy3). The link to the history is: Galaxy Galaxy is a community-driven web-based analysis platform for life science research. The tool creates same graphic without text (PNG and svg when imported into…

Great, thanks for sharing this. I can see the missing text in the last png dataset. I am reviewing as to why.

Galaxy Community Help

Rendering svg from galaxy

troubleshooting, visualization

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