Dear Galaxy Europe Team,
I am a PhD student using Galaxy Europe for bacterial genomics analyses. I work with large datasets (more than 50 bacterial genomes) and routinely use Prokka followed by ABRicate for resistome, virulome, and plasmidome analyses.
Currently, the interface only allows selecting up to 50 datasets at once. This makes it difficult to generate ABRicate summary reports and increases the risk of mistakes because I need to split the analyses into multiple batches.
Would it be possible to increase this dataset selection limit (for example, to 100 or more datasets), or is there another recommended solution for handling larger collections?
Thank you very much for your support.
Best regards,
Ana Isabelle