Screening assembled genomes for contamination using NCBI FCS workflow not working

[jennaj]

Hi @Dibya

Thanks for posting back the bug report page, very helpful!

Please try switching to use current version of the tool. Exactly where to make the change in the workflow is in the screenshots. Please let us know if you need more help with this and if it works!

@jennaj

The solution here is to update the tutorial workflow, or your own workflow, or your direct run, to use the most current version of the NCBI FCS tool when working a UseGalaxy.org or any other server where you may be having problems.

We might be able to correct the older version but it isn’t a priority. Full details are in here if you aren’t sure how to do this (screenshots, FAQs) → Correcting errors with NCBI FCS GX Foreign Contamination Screening assembled genomes