SPAdes queued for hours

[jennaj]

Welcome @Chris_Tsoukas

Assembly tools tend to queue for longer due to demand on the larger nodes. More details at → FAQ: My jobs aren't running!

@jennaj

When working at UseGalaxy.org, UseGalaxy.eu, or UseGalaxy.org.au, your analysis jobs execute at large scale academic clusters. Hundreds of thousands of jobs process each month!

• Use a Workflow for batch work.
• Allow queued (grey color) and executing (yellow-orange) datasets to finish processing.
• Deleting and rerunning puts your job back at the end of the queue again!
• Job priority is the exactly the same for everyone.
• Be patient. Galaxy is a free service, when a lot of people are using it, you may have to wait longer than usual (especially for ‘big’ jobs, e.g. alignments).

Current job queue

How to see how many jobs are running at the UseGalaxy.eu server:

@jennaj

Hopefully we can help! Yes, the tool does appear to be processing as expected UseGalaxy.eu → How to see the UseGalaxy.eu job queue statistics - #2 by jennaj

Updated Homepage

The view on the server homepage changed a bit recently, so this is how the same landmarks are now organized:

The direct link is → https://stats.galaxyproject.eu/

I see about 130 queued SPADes jobs, so yours is likely in that set! The best advice is to leave your jobs queued so they have a chance to move up in the queue and execute!

Hope this helps to explain how the job queues work! Follow up questions are welcome!