Hi, I am unable to download and extract Reads from NCBI SRA on local Galaxy . I installed the sra tolls from the tool shed. I gave me 3 tools: download and extract Reads from NCBI SRA on local Galaxy in BAM ,FASTQ and FASTA/Q format. I tried both FASTQ and FASTA/Q tools. Every time I get the same …

Hi @Marika , you can try upload using URLs. While this option requires manual cut and past, on some servers it is significantly faster than the dedicated importer tools. Both NCBI and ENA provide links to fastq(.gz) files. Copy and past link into Galaxy Upload menu > Paste/Fetch data section. At lea…

Unable to download and extract Reads from NCBI SRA on local Galaxy