Topics tagged sra

Topic	Replies	Views	Activity
"Faster Download and Extract Reads in FASTA/Q" output is green but without data usegalaxy.org support ncbi , sra	1	161	September 8, 2022
Unable to download and extract Reads from NCBI SRA on local Galaxy download , sra	1	210	March 28, 2022
Downloading paired end data usegalaxy.eu support sra	3	208	November 5, 2021
NCBI SRA Fastq (convert SRA files from GEO into fastq files) usegalaxy.org support metadata , fastq , sra	7	464	June 22, 2021
Fatal error in galaxy program: Problems retrieving SRA data from NCBI usegalaxy.org support ncbi , sra	4	863	April 15, 2021
Running large-scale jobs with "Faster Download and Extract Reads in FASTQ " usegalaxy.eu support ncbi , sra	1	590	April 6, 2021
how to configure fastq_dump on a local galaxy build on aws ec2? fastq , sra , galaxy-local	0	332	March 5, 2021
Empty collections resulting from NCBI SRA tool with accession list input usegalaxy.org support ncbi , sra	5	375	January 26, 2021
Get selected reads from SRA data sets usegalaxy.org support fastq , sra , filter	0	342	December 1, 2020
Getting Data from EBI SRA issues sra	3	278	October 7, 2020
Separate/split replicates in single SRA file usegalaxy.org support rna-seq , sra	2	820	June 4, 2020
Download FASTQ reads from SRA usegalaxy.org support sra	0	394	May 27, 2020
fasta to fastq; fastsanger.gz to fastq; SRA to fastq fastq , ncbi , sra , fastqsangergz , fastqsanger	3	2623	February 11, 2020
Error with "Download and Extract Reads in FASTA/Q format from NCBI SRA" usegalaxy.org support ncbi , sra , get-data	4	1481	September 23, 2019
problem with "Download and Extract Reads in FASTA/Q format from NCBI SRA” for local galaxy download , sra , galaxy-local	1	1022	September 9, 2019
SRA file and run fastq-dump error on local Galaxy admin , tool-install , fastq , ncbi , sra	4	988	December 12, 2018