Usegalaxy.eu HUMAnN 3.9+galaxy1 fails because ChocoPhlAn directory contains mixed database versions

[jennaj]

@jennaj

Hello @sri_microbiome

To incorporate HUMAnN with MetaPhlan, please try following the protocol outlined in this tutorial and associated workflows!

• Hands-on: Metatranscriptomics analysis using microbiome RNA-seq data / Metatranscriptomics analysis using microbiome RNA-seq data / Microbiome

The reads are prepared, then sent through both tool pipelines independently, then the results from each are merged together after. This is what allows the reference data sources to work together.

Hope this helps!

Please give this a try!