Hello! I have to fill parameters manually into my workflow which are mostly file names and sample names. I have to select from about 7 files about 20 times and enter similar but slightly different sample names (e. g. wn0552.A7CE75785, wn0552.A7CE75785_tumor, wn0552.A7CE75785_normal) for another 20 …

Please check out Using Workflow Parameters , I think it covers all of this, minus the last part. If tools can use multiple threads or cores they can consume $GALAXY_SLOTS, which is set as appropriate based on the resources the admin has configured.

Workflow automation?

wormball April 9, 2021, 9:39am 4

Add Compose text parameter value tool to the workflow
Add two more “Components” using the “Insert components” button
Add the Regex Find And Replace

Unfortunately i can not find any of the mentioned entities.

Which tool is guilty? Custom local Galaxy install

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Workflow automation?

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