Hello everyone,
I am currently using the Galaxy Europe Interactive R environment for a single-cell RNA-seq analysis workflow, but I am running into a persistent issue when trying to install Bioconductor packages.
Problem
When I try to install packages such as:
- DropletUtils
- scDblFinder
- SingleCellExperiment
the installation fails with repeated errors indicating that R cannot access the Bioconductor repository index.
Error message
cannot open URL ‘https://bioconductor.org/packages/3.20/bioc/src/contrib/PACKAGES’