Sorry! I showed the text from the log file, but I meant the text in the Commmand Line
field, from the Job Information
python ‘/opt/galaxy/shed_tools/toolshed.g2.bx.psu.edu/repos/bgruening/bismark/ff6ee551b153/bismark/bismark_methylation_extractor.py’ --multicore “${GALAXY_SLOTS:-4}” --infile ‘/data/dnb03/galaxy_db/files/f/5/b/dataset_f5b173bc-5683-4e3a-aae9-bbfab0223a5b.dat’ --single-end --splitting_report ‘/data/dnb03/galaxy_db/job_working_directory/022/607/22607745/outputs/galaxy_dataset_d5147783-6aac-4b1f-ab32-0634ac21f788.dat’ --mbias_report ‘/data/dnb03/galaxy_db/job_working_directory/022/607/22607745/outputs/galaxy_dataset_9855a442-64fa-4f61-9305-d4f581661ad8.dat’ --cytosine_report ‘/data/dnb03/galaxy_db/job_working_directory/022/607/22607745/outputs/galaxy_dataset_5a7de963-e281-40a2-af49-df099dde7ebb.dat’ --genome_file ‘/data/db/data_managers/h7n7_360722/seq/h7n7_360722.fa’ --cx_context --comprehensive --compress
‘/data/dnb03/galaxy_db/job_working_directory/022/607/22607745/outputs/galaxy_dataset_d1e0feca-7641-4b02-84e6-7dff0081a634.dat’ --log_report ‘/data/dnb03/galaxy_db/job_working_directory/022/607/22607745/outputs/galaxy_dataset_61ded233-440e-4bf5-81b8-9214fa10b5d8.dat’