can i perform docking for a protein without ligand

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Docking of a protein with no ligand

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Welcome, @FOZIAH_ALSHUBAILY

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With that context, I am not sure I understand what your question is about, or if it was just a comment? Can you please explain more about your goals? The short answer is that you would need at least two molecules to perform a protein docking analysis, and to comment more is highly situational!

Thanks! :slight_smile: