Hi,
I’m having trouble finding the default settings in featureCounts. I looked at the command-line output after running it, but I’d like to know the full default code and parameters used. Could anyone help me with this?
Thanks in advance!
Hi @Bana
Please follow the links at the bottom of the tool form over to the Bioconductor Vignette for the tool to learn about all of the potential options with the original tool. Most of those are modeled on the Galaxy form, and you can enter an R environment in Galaxy to access it in full.
Hope this helps! 