I am submitting my wgs to ncbi. and they are asking for the coverage.
I have assembled my genome using Flye (in galaxy) and successfully have it. But i don’t know how to get the info? please help!
Hi @Ghazal_Aziz
This is from description of Flye tool in Galaxy:
Extra information about contigs/scaffolds is output into the assembly_info.txt file. It is a tab-delimited table with the columns as follows:
- Contig/scaffold id
- Length
- Coverage
The description is available at job setup, at the bottom of the page.
Kind regards,
Igor
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