Hi there,
I have downloaded my files into galaxy and am able to retrieve FastQC and MultiQC reports, but I can’t get the tool ‘sortmeRNA’ to work - it always comes up with a fatal error (
) (error below- says no file in directory? but all other tools used seem to work…). I’m using the data from reads that have been trimmed using trimmomatic, using the paired read option and putting R1 forward read, R2 reverse reads, however even without using trimmomatic first still doesnt seem to like it… any one else had this issue before? Thanks!
e[0;31mERRORe[0m: the file could not be opened: No such file or directory.
