I have the whole genome sequence of E.coli and Campylobacter spp. and would like to get the sequence type by CGMLST schema. I’ve tried galaxy tools: Multilocus sequence typing - blast and got only the allelic numbers data. How to get the nomenclature of sequence type? Thank you in advance.
Related topics
Topic | Replies | Views | Activity | |
---|---|---|---|---|
Can MLST assignments be done using Galaxy tools? | 1 | 632 | August 2, 2021 | |
Tiger Genome sequence upload request | 0 | 354 | May 28, 2020 | |
MLST tool output unexpected. | 3 | 127 | April 25, 2024 | |
SerotypeFinder?
|
1 | 213 | August 24, 2023 | |
Sequence to gene name | 2 | 852 | July 23, 2019 |