For some context, I’m going to share this first.
I’m not sure if you are following one of the tutorials or not yet, or what kind of data you have, but the first two in that list have simplified usage – the first for single cell, the second for RNA-seq. Maybe compare the usage to see if you can notice what is going wrong?
Then, we have prior Q&A here → goseq . A common solution is to adjust some of the parameters near the end of the form, in particular the toggle to ignore any NA values in the data.
Please give those a review, and let us know if you solve this! If you would like more help here, you are welcome to share back more about your specific usage case and error message. How to share your work is in the banner of this forum, also here → How to get faster help with your question. You can unshare after. Thanks! 