HISAT2: Unknown or invalid visualization: igv mesage

[jmachuca10]

Hello,
My HISAT2 files finished uploading and I wanted to view the data by clicking the eyeball icon, but I received this message: “Unknown or invalid visualization: igv”
Can anyone help with this?
Thank you!

[jennaj]

Hi @jmachuca10

Let’s combined your question into the other one where the developer’s responded.

@dannon

Sorry for the inconvenience here – during the release candidate for 25.0 we got a little ahead of our skis. What you’re seeing is Galaxy trying to use the visualization-first framework for previewing datasets (Visualization-First Display functionality by dannon · Pull Request #20190 · galaxyproject/galaxy · GitHub). Deployed on main, bam is currently configured to use igv.js, which isn’t quite yet available.

Thanks for the report, and we’ll get this resolved as soon as possible.

Thanks!