I have a single history within my account that reports as having 64 shown, 1415 deleted, and 1365 hidden datasets. However, I can only see 296 datasets (even after revealing hidden datasets). I have tried purging deleted datasets - it reports that 0 datasets have been purged. I do not know why th…

Find all Histories and purge (aka permenently delete) those not needed. Under the Histories Options (gear icon, top of right History panel), choose Saved Histories from the list. Click on Advanced Search , then choose status = all . Locate deleted but not permemently deleted histories and …

Hi Amir, Almost all histories listed there were marked as “permanently deleted” . The handful that were marked as “deleted” were few, and had no files in them (unnamed histories). Deleting these few didn’t free up any space. The only active history listed there is my current history. It looks l…

Try refreshing your session by clicking on the upper left “Galaxy” icon. Logging out, then back in again will also refresh the session. When tabbing through pages, avoid using the “Operations of multiple datasets” function first. Do that after the page is loaded. Then you can check off the ones yo…

i had this problem once but i dont remember exactly how i done that. i did take a look now and i suggest some way which i think is easer way than the one @jennaj suggested. Click view histories on the top right of galaxy, it looks like a book, then you see “…” on top . click on that and select "in…

[image] amir: Click view histories on the top right of galaxy, it looks like a book, then you see “…” on top . click on that and select "include deleted histories. and purge them from there Great advice @amir That should work, too. Plus you can show/hide deleted or hidden datasets at the top…

I also had the same problem of not being able to permanently delete certain unneeded datasets within a single history but your solution worked! Thanks!

Galaxy Community Help

History Contains Invisible Files That Cannot Be Purged

usegalaxy.org support

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