I can't visualize vcf file after using snippy tool using igv

1

http://localhost:60151/load?genome=https%3A%2F%2Fusegalaxy.eu%2Fdisplay_application%2F26c75dcccb616ac87184733f767e8033%2Figv_fasta%2Flocal_default%2F1028db57c5404cf6%2Fdata%2Fgalaxy_26c75dcccb616ac87184733f767e8033.fasta&merge=true&name=seqret+on+data+3

That is the link it always takes me to. Kindly assist

2

Hi @DAVID_ADEDOKUN

Have you installed the IGV application locally yet? How to → FAQ: Using IGV with Galaxy

You can post screenshots if that helps to explain what may be going if this is not enough.

Let’s start there! :slight_smile: