As you can see in the image, the Kmer distribution field is empty: “No options available”
What am I missing?
Is there another tool I must use first to generate a Kmer distribution?
As you can see in the image, the Kmer distribution field is empty: “No options available”
What am I missing?
Is there another tool I must use first to generate a Kmer distribution?
Hi @fullmooninu
There are two versions of the tool: KrakEN
and `KrakEN2".
The admins of the EU server would need to create/provide the built-in index for KraKEN
.
This older version of the KrakEN
tool suite is available at usegalaxy.org and usegalaxy.org.au – and it has a Kmer indexed at both.
BTW – it looks as if you are searching the tool panel with a typo. Try “kraken” instead of “braken” to find all tools in the suite. Or, with “kraken2”. The two versions are incompatible as far as I know, with distinct indexes.
Tutorials: Search Tutorials
ping @gallardoalba @wm75
I installed the DBs, please check tomorrow again. Thanks!