MiModD Extract Variant Sites - filtering germline

hi is there a way to filter germline variants from this output eg with gnomAD or similar on Galaxy?
thank you

Welcome, @Imran_Noorani

We have a really comprehensive post about using the gnomAD reference data at a UseGalaxy server. Try at UseGalaxy.eu since they can handle data of this size best.

If you are not sure how to work with VCF data, please see our tutorials here for some examples, guides, and workflow templates!

Hope this helps! :slight_smile: