As the Antechamber is the initial tool to run the GROMACS in Galaxy. But i have received errors while running antechamber in galaxy.
Error1: for Protein-Ligand Complex
Blockquote
Welcome to antechamber 19.0: molecular input file processor.acdoctor mode is on: check and diagnose problems in the input file.
– Check Format for pdb File –
Status: pass
Warning: Detected more than 10 Residue sequence numbers;
this may b
Error 2:
tool error
An error occurred with this dataset:
(sqlite3.OperationalError) database is locked (Background on this error at: Error Messages — SQLAlchemy 2.0 Documentation
Error 3:
error
An error occurred with this dataset:
Welcome to antechamber 19.0: molecular input file processor.acdoctor mode is on: check and diagnose problems in the input file.
– Check Format for pdb File –
Status: pass
– Check Unusual Elements –
Status: pass
– Check Open Valences –
St
There are random errors received.