Slurmstepd error

[GraemeT]

problem with using BWA on usegalaxy.org

Hello I was about to file a similar problem/topic so no help here just confirming your report. I too have been getting “slurmstepd: error: _prec_extra: Could not find task_memory_cg, this should never happen” working on usegalaxy.org. I succesfully mapped a set of Illumina PE reads against a refenence genome in fasta format using BWA-MEM. As from yesterday (04 April 2020) I have failed consistently to filter the resulting bam file using Filter BAM. Initially I was chaining three filters and …

Same problem on the above topic - can the two threads be condensed at all?

Thanks