On the GeMoMa website (I am unable to link it, but it’s the Jstacks one) it says that GeMoMa is able to be used within Galaxy, but when searching for it in Galaxy’s tools, I can not find it. Additionally, when I click the link in the GeMoMa wiki that should lead to the tool, I receive a 502 Bad Gateway error. There are also no other resources online that describe using GeMoMa in Galaxy. Can anyone point me in the right direction to enable using GeMoMa in Galaxy, or give me an alternate solution that includes using a gene prediction program (similar to GeMoMa) with a simple user interface (similar to Galaxy)?
Welcome @katerinagarkova
The public server hosting these tools does appear to be currently offline. The tools themselves do not appear to be available as wrapped Galaxy tools (yet) or I am not reviewing correctly!
I’ve written into their support team and invited them to comment on this topic with more details! Hopefully they will get back to us!
Then, for genome annotation, we do host alternative methods at the UseGalaxy servers!
Many of these are supported by tutorials at the 
Galaxy Training Network (GTN).
These processes are sophisticated and in active use by the 
Vertebrate Genome Project (VGP).
This is where to start! 
Dear @katerinagarkova,
our Galaxy server s currently offline due to problems with the scheduling system. We hope to be back online by the end of the week.
Best regards,
Jan
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Our Galaxy server is running again. Please note that for GeMoMa, you cannot submit more than 10 genes per job due to restricted compute power on our server. If you want to run larger jobs (e.g., annotating complete genomes), please reach out.
Best,
Jan
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