Hello! I am trying to use the “ARTIC minion” tool on galaxy and even though I select different version of the ARTIC primers (from the drop down menu or bed files I upload) it still uses the V1 (when I open the log file is says that it uses V1 scheme). Can anyone tell me what can be the problem? Beca…

@tbzh13 that log is a bit unfortunate and misleading, but what the tool actually does seems to be the right thing. I just tested with a primer scheme from one of my histories and the generated command line has this part: mkdir -p 'scheme/name/V1' && ln -s '/data/dnb-ds02/galaxy_db/files/020/532/da…

ARTIC Minion tool

usegalaxy.eu support

jennaj March 24, 2023, 10:04pm 2

Welcome, @tbzh13

To confirm proper inputs, you could use this shared history resource to compare/replace what you are using now. SARS-CoV-2 ARCTIC V4 files - #3 by wm75

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ARTIC Minion tool

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