CheckM lineage_wf

Hi @sm9412

I think I helped you with the first error via a bug report, yes?

Good that you tried at the EU server!

Do you want to share the entire job log message? Find this using the i-icon within a dataset. Then scroll down into the report and expand the sections.

You can screenshot all of that and post back here in a reply. Make sure to capture the parameters at the top, expand each input section, then fully expand the outputs and all the different log sections since I’m not sure exactly which part will matter yet. This will be several screenshots but that is ok! If you have more than one job that failed, and the messages are different, then please capture those, too. We are looking for clues to solve this!

Another clue could come from a tool like Fasta Statistics. You could run this on the same collection you are using for this tool’s input. What is the base composition? Any IUPAC characters? What about Ns?

You could also post back a link to your shared history with the inputs and output failed job(s). But I remember what those inputs looked like before – nucleotide bin output from MetaBAT2, correct? – so that might not be needed yet if these are the same. You decide. More context means better, more specific help.

Let’s start there! :slight_smile:

Xref →