It doesn’t appear that Kraken2 will run when using the DTDB database, I use others just fine.
Hi @Jon_Colman
Thanks for letting us know. We are reviewing closer!
One of my testing histories as an example we can track together here.
- history → https://usegalaxy.org/u/jen-galaxyproject/h/test-kraken-kraken2
- testing job against GTDB → https://usegalaxy.org/datasets/f9cad7b01a472135902877197256c5cf/details
If you want to share back a link to your job(s), we can also use those.
More soon! ![]()
Update:
One of our clusters needed some tuning! There will be a small backlog of jobs to process, then all should resume as normal. Thanks again for letting us know! ![]()
I’ll also be watching my test job above (this one will wait the same as everyone else), to double check that there isn’t anything special going on with the GTDB index (apart from that particular data/tool combination requiring the problematic cluster). More followup about this in a few hours.
Hi @Jon_Colman
I saw that your job had started executing a few hours ago, and now both of my tests have started as well!
Then, to anyone else reading along who may have experienced delays today: leaving jobs queued is how to move up in the waiting position. For any jobs that do not begin to execute over the next few hours, please consider starting a new topic, sharing your history, and we can help to review to confirm more is not going on! ![]()