Hopefully you have solved this by now but I wanted to check in!
Most message about technical dependencies can be ignored since the dependencies are handled already by the server administrators.
Do you see any other messages in the job logs? Or on the expanded output dataset itself? Do those suggest what to check? You shouldn’t have trouble with the tutorial data but might need to tune more for your own data.
If this is not enough help, you are still welcome to generate a share link to your history and post that back into your reply. The link gives all the context at once: where you are working, the inputs, the full parameters, all of the logs.
XRef → Hands-on: Genome annotation with Maker / Genome annotation with Maker / Genome Annotation
Please let us know if this helps or not, or if you solved this already! 