Hello, I have tried to run ExomeDepth from galaxy but the generated output does not indicate column 2 of the gene and I am unable to graph the results, thanks for your help

Welcome, @egarzon Scroll down into the help section on the tool form to review what this specific tool outputs. Column 2 of the output from this tool is the chromosome identifier as represented in the BED input data. Column 6 contains a sample name. Technically, this is whatever was in the 4th co…