Hello Galaxy community,
As I use the SingleCellLoomExperiment dataset (the output of “Scater: Calculate QC metrics”) as input for “Scater: plot library QC”, there is error message for this command.
I do not understand why, because the same output can be used for running “Scater: normalize SCE” “Scater: filter SCE”, and “Scater: PCA plot.”
Thanks in advance, if anyone can help.
Susan