Hello,
I am new to bioinformatics and Galaxy so may have a naive question.
I have generated a multi-sample VCF and would like to remove the sites where I am missing data from any of the samples, so I can only compare variants where I have data for all individuals.
thanks for the help Jen. That actually didn’t work for me as it still outputted all the lines of my data but somehow removed the sample information.
However, I did realize that number of samples with data (NS) was already one of my info fields so I was able to filter by NS=total number of samples. And this worked!