I am trying to align my fastqsanger.gz files with HISAT2 but it is not working. The problem arose after I had successfully ran an initial set of samples for DEGs, using HISAT2 as part of it. Now that I uploaded the rest of my files, the concatenated fastqsanger.gz files will not go through HISAT2. I…

Update: Fixed @japiz [image] Tophat not working??? - Deprecated tool, use HISAT2 instead Note to all end users running mapping: Using all defaults for the “Job Resources” parameter is a good choice now again. No need to target a particular cluster anymore. Allowing Galaxy to choose the target c…

HISAT2 Not working

usegalaxy.org support

jennaj October 10, 2019, 5:01pm 11

Update: Fixed

@japiz

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HISAT2 Not working

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