I have been struggling with running MACS2 for the past two weeks. The software is not producing narrowpeaks results and bed results when adding an input. I am not sure what is the issue and I have tried running it many times with different parameters. I have checked EBI/SRA and the data is loaded co…

MACS2 narrowpeaks results are empty when adding an input

jennaj June 16, 2022, 1:49am 2

Topic		Replies	Views
ChIPseeker missing first peak in the interval file? macs2 , chip-seq , epigenetics	2	244	January 10, 2024
MACS2 scientific result troubleshooting troubleshooting , macs2 , chip-seq , mapping , blast , filter-bam , igv , fastqsanger , epigenetics , picard_markduplicates	6	859	June 16, 2022
ATAC-Seq MACS2 callpeak error	1	33	October 2, 2024
Error in MACS2 paired end peakcalling macs2	0	555	March 24, 2021
MACS peaks calling from bedgraph data, ChIP-Seq usegalaxy.eu support macs2	5	5404	July 13, 2019