Hello.
I did every thing for Goseq acording to instruction of Goseq tool.
But i got that error
I also put the link of my history for better understanding problem
https://usegalaxy.eu/u/amir/h/memar
Rscript ‘/opt/galaxy/shed_tools/toolshed.g2.bx.psu.edu/repos/iuc/goseq/8b3e3657034e/goseq/goseq.r’ --dge_file ‘/data/dnb02/galaxy_db/files/012/160/dataset_12160916.dat’ --length_file ‘/data/dnb02/galaxy_db/files/012/160/dataset_12160948.dat’ --genome hg38 --gene_id ensGene --fetch_cats ‘GO:CC,GO:BP,GO:MF’ --wallenius_tab ‘/data/dnb02/galaxy_db/job_working_directory/006/430/6430123/galaxy_dataset_13106791.dat’ --repcnt 0 --p_adj_method ‘BH’ --use_genes_without_cat ‘false’ --top_plot ‘/data/dnb02/galaxy_db/job_working_directory/006/430/6430123/galaxy_dataset_13106792.dat’ --categories_genes_out_fp ‘/data/dnb02/galaxy_db/job_working_directory/006/430/6430123/galaxy_dataset_13106793.dat’