Hello. When running the Stacks and Stacks2 pipelines on a local install, it is possible to process_radtags on ddRAD data without a barcode by leaving it blank. This is important for the way my genomic center sends my data, as they already demultiplex it and send as individual files with the ID of the individual in the file name for my paired-end ddRAD tags. Could you please update the tool so that this is also an option in Galaxy? I think more sequencing centers might do this in the future (pooling samples from multiple users so that you don’t have to fill a whole lane with your project).
Thank you,
Lucinda
Hi @lplawson,
I’m working on it; I think that this functionality will be available this week.
Regards