i done bcftools view, with filter option -2 to filter biallelic variants.but its showing 0 lines
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Hi @Praseedas
You can share your work for more feedback from the community. If you are following a tutorial already, please also share a link to which one for context.
- Troubleshooting resources for errors or unexpected results
- How to get faster help with your question
Instructions for these manipulations are directly on the tool forms, and tutorials are available here → Variant Analysis / Tutorial List
Have you annotated your VCF to include the flags you are interested in filtering on yet? See the tool SnpEff if you are not sure what this means. If you have done that already and are still having trouble with a filter, please share your history and we can try to help more.