I’m curious if anyone could help me to reformat a file that only has sequencing positions to a standard .vcf file. The file format I have is:
And I need to transform them into this format:
#CHROM POS ID REF ALT QUAL FILTER INFO
chrI 1222 haw1 A C . . MPU=-21.9682
chrI 2651 haw2 T A . . MPU=-21.9337
chrI 3659 haw3 C T . . MPU=-21.9094
I appreciate any help and suggestion. Many thanks!